Publications

Generate a list from PubMed (somewhat incomplete) or from ResearcherID.

2017 2016 2015 2014 2013 2012 2011 2010 2009 2008 2007 2006 2005 2004 2002 2001 2000 1999 1998 1997 1996 1995
2017
Coppola S, Carnevale I, Danen EHJ, Peters GJ, Schmidt T, Assaraf YG, Giovannetti E (2017) A mechanopharmacology approach to overcome chemoresistance in pancreatic cancer., Drug Resist. Updat., 31, 43-51.
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Richter D, Moraga I, Winkelmann H, Birkholz O, Wilmes S, Schulte M, Kraich M, Kenneweg H, Beutel O, Selenschik P, Paterok D, Gavutis M, Schmidt T, Garcia KC, Müller TD, Piehler J (2017) Ligand-induced type II interleukin-4 receptor dimers are sustained by rapid re-association within plasma membrane microcompartments., Nat Commun, 8, 15976.
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Becchetti A, Crescioli S, Zanieri F, Petroni G, Mercatelli R, Coppola S, Gasparoli L, D’Amico M, Pillozzi S, Crociani O, Stefanini M, Fiore A, Carraresi L, Morello V, Manoli S, Brizzi MF, Ricci D, Rinaldi M, Masi A, Schmidt T, Quercioli F, Defilippi P, Arcangeli A. (2017) The conformational state of hERG1 channels determines integrin association, downstream signaling, and cancer progression., Science Signaling, 10, eaaf3236.
[DOI] [pdf]
Askes SH, Leeuwenburgh VC, Pomp W, Arjmandi-Tash H, Tanase S, Schmidt T, Bonnet S (2017) Water-Dispersible Silica-Coated Upconverting Liposomes: Can a Thin Silica Layer Protect TTA-UC against Oxygen Quenching?, ACS Biomater Sci Eng, 3, 322-334.
[DOI] [pdf]
2016
Askes SH, Pomp W, Hopkins SL, Kros A, Wu S, Schmidt T, Bonnet S (2016) Imaging Upconverting Polymersomes in Cancer Cells: Biocompatible Antioxidants Brighten Triplet-Triplet Annihilation Upconversion., Small, 12, 5579-5590.
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Moeton M, Stassen OM, Sluijs JA, van der Meer VW, Kluivers LJ, van Hoorn H, Schmidt T, Reits EA, van Strien ME, Hol EM (2016) GFAP isoforms control intermediate filament network dynamics, cell morphology, and focal adhesions., Cell. Mol. Life Sci., 73, 4101-20.
[DOI] [pdf]
Apetri MM, Harkes R, Subramaniam V, Canters GW, Schmidt T, Aartsma TJ (2016) Direct Observation of α-Synuclein Amyloid Aggregates in Endocytic Vesicles of Neuroblastoma Cells., PLoS ONE, 11, e0153020.
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Beletkaia, E., S. F. Fenz, W. Pomp, B. E. Snaar-Jagalska, P. W. C. Hogendoorn, and T. Schmidt (2016) CXCR4 signaling is controlled by immobilization at the plasma membrane., BBA – Mol Cell Res, 1863, 607-616.
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Tulotta C, Stefanescu C, Beletkaia E, Bussmann J, Tarbashevich K, Schmidt T, Snaar-Jagalska BE (2016) Inhibition of cross-species CXCR4 signaling by the small molecule IT1t impairs triple negative breast cancer early metastases in zebrafish., Dis Model Mech, 9, 141-153.
[DOI] [pdf]
2015
Sand LG, Scotlandi K, Berghuis D, Snaar-Jagalska BE, Picci P, Schmidt T, Szuhai K, Hogendoorn PC (2015) CXCL14, CXCR7 expression and CXCR4 splice variant ratio associate with survival and metastases in Ewing sarcoma patients., Eur. J. Cancer, 51, 2624-33.
[DOI] [pdf]
Harkes R, Keizer VI, Schaaf MJ, Schmidt T (2015) Depth-of-Focus Correction in Single-Molecule Data Allows Analysis of 3D Diffusion of the Glucocorticoid Receptor in the Nucleus., PLoS ONE, 10, e0141080.
[DOI] [pdf]
Sand LG, Jochemsen AG, Beletkaia E, Schmidt T, Hogendoorn PC, Szuhai K (2015) Novel splice variants of CXCR4 identified by transcriptome sequencing., Biochem. Biophys. Res. Commun., 466, 89-94.
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S.H.C. Askes,N.L. Mora, R. Harkes, R.I. Koning, B. Koster, T. Schmidt, A. Kros & S. Bonnet (2015) Imaging the lipid bilayer of giant unilamellar vesicles using red-to-blue light upconversion., Chem. Comm., 51, 9137.
[DOI] [pdf]
A. Pezzarossa, F. Zosel & T. Schmidt. (2015) Visualization of HRas Domains in the Plasma Membrane of Fibroblasts., Biophys. J., 108, 1870.
[DOI] [pdf]
H.E. Balcioglu, H. van Hoorn, D.M. Donato, T. Schmidt and E.H.J. Danen. (2015) The integrin expression profile modulates orientation and dynamics of force transmission at cell–matrix adhesions., J Cell Science, 128, 1316.
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Jansen KA, Donato DM, Balcioglu HE, Schmidt T, Danen EH, Koenderink GH (2015) A guide to mechanobiology: Where biology and physics meet., Biochim. Biophys. Acta, 1853, 3043-52.
[DOI] [pdf]
2014
S Coppola, G Caracciolo and T Schmidt. (2014) Exact occupation probabilities for intermittent transport and application to image correlation spectroscopy., New J. Phys., 16, 113057.
[DOI] [pdf]
Sachse R, Dondapati SK, Fenz SF, Schmidt T & Kubick S. (2014) Membrane protein synthesis in cell-free systems: From bio-mimetic systems to bio-membranes., FEBS Lett., 588, 2774-81.
[DOI] [pdf]
Hedde van Hoorn, Rolf Harkes, Ewa M. Spiesz, Cornelis Storm, Danny van Noort, Benoit Ladoux, and Thomas Schmidt (2014) The Nanoscale Architecture of Force-Bearing Focal Adhesions., Nano Lett., 14, 4257–4262.
[DOI] [pdf]
M.E. van Royen, W.A. van Cappellen, B. Geverts, T. Schmidt, A.B. Houtsmuller and M.J. Schaaf. (2014) Androgen receptor complexes probe DNA for recognition sequences by short random interactions., J. Cell Sci., 127, 1406-16.
[DOI] [pdf]
F.L. Groeneweg, M.E. van Royen, S. Fenz, V. Keizer, B. Geverts, J. Prins, E.R. de Kloet, A.B. Houtsmuller, T. Schmidt & M.J. Schaaf. (2014) Quantitation of Glucocorticoid Receptor DNA-Binding Dynamics by Single-Molecule Microscopy and FRAP., PLoS One, 9, e90532.
[DOI] [pdf]
S.F. Fenz, R. Sachse, T. Schmidt & S. Kubick (2014) Cell-free synthesis of membrane proteins: Tailored cell models out of microsomes., Biochim Biophys Acta., 1838, 1382-8.
[DOI] [pdf]
O. Beutel, J. Nikolaus, O. Birkholz, C. You, T. Schmidt, A. Herrmann and J. Piehler. (2014) High-fidelity protein targeting into membrane lipid microdomains in living cells., Angew Chem Int Ed Engl., 53, 1311-1315.
[DOI] [pdf]
2013
B.E. Snaar-Jagalska, A. Cambi, T. Schmidt & S. de Keijzer. (2013) Single-molecule imaging technique to study the dynamic regulation of GPCR function at the plasma membrane., Methods Enzymol., 521, 47-67.
[DOI] [pdf]
2012
S.F. Fenz, A. Pezzarossa and T. Schmidt (2012) The Basics and Potential of Single-Molecule Tracking in Cellular Biophysics., In: Edward H. Egelman, editor: Comprehensive Biophysics – Biophysical Techniques, 2, 260-272.
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2011
Anna Pezzarossa, Susanne Fenz & Thomas Schmidt (2011) Probing Structure and Dynamics of the Cell Membrane with Single Fluorescent Prot, Springer Series on Fluorescence, Ed.: G. Jung, 113.
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Tobias Meckel, Stefan Semrau, Marcel Schaaf & Thomas Schmidt (2011) Robust assessment of protein complex formation in vivo via single molecule inten, J. Biomed. Opt, 16, 076016.
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Arnauld Serge, Sandra de Keijzer, Freek Van Hemert, Mark R. Hickman, Dale Hereld, Thomas Schmidt and B. Ewa Snaar-Jagaska (2011) Quantification of GPCR internalization by single-molecule microscopy in living cells., Integrative Biology, 3, 675-683.
[DOI] [pdf]
Marcel J. M. Schaaf & Thomas Schmidt (2011) In Vivo Single-Molecule Microscopy Using the Zebrafish Model System., in Y. Sako & M. Ueda (eds.), Cell Signaling Reactions: Single-Molecular Kinetic.
[DOI] [pdf]
Stefan Semrau, Laurent Holtzer, Marcos Gonzalez-Gaitan & Thomas Schmidt (2011) Quantification of biological interactions with Particle Image Cross Correlation, Biophys. J, 100, 1810-8.
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Stefan Semrau, Anna Pezzarossa & Thomas Schmidt (2011) Microsecond Single-Molecule Tracking (usSMT)., Biophys. Lett, 100, L19-L21.
[DOI] [pdf]
2010
Anna Kicheva, Laurent Holtzer, Ortrud Wartlick, Thomas Schmidt & Marcos Gonzále (2010) Quantitative Imaging of Morphogen Gradients in Drosophila Imaginal Discs., in Imaging in Developmental Biology: A Laboratory Manual. Chap.37, CSHL Press.
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Paige Shaklee, Timon Idema, Marileen Dogterom, Cees Storm & Thomas Schmidt (2010) Kinesin recycling in stationary membrane tubes., Biophys. J, 99, 1835-1841.
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Stefan Semrau, Marilyn Monster, Matthijs van der Knaap, Bobby Florea, Thomas Schmidt and Mark Overhand (2010) Membrane lysis by gramicidin S visualized in red blood cells and giant vesicles., BBA Biomembranes, 1798, 2033-2039.
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Freek van Hemert, Milena Lazova, B.Ewa Snaar-Jagalska & Thomas Schmidt (2010) Mobility of G proteins is heterogeneous and polarized during chemotaxis., J. Cell Sci, 123, 2922-30.
[DOI] [pdf]
Timon Idema, Stefan Semrau, Cornelis Storm & Thomas Schmidt (2010) Membrane mediated sorting., Phys. Rev. Lett, 104, 198102-1:4.
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Paige M. Shaklee, Stefan Semrau, Stefan Kubick, Marileen Dogterom & Thomas Schmidt (2010) Protein incorporation in giant vesicles under physiological conditions., Chem. Bio. Chem, 11, 175:179.
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Paige M. Shaklee, Line Bourel-Bonnet, Marileen Dogterom & Thomas Schmidt (2010) Nonprocessive motor dynamics at the microtubule membrane tube interface., Biophys. J, 98, 93-100.
[DOI] [pdf]
2009
Wiepke J A Koopmans and Ruth Buning and Thomas Schmidt and John van Noort (2009) spFRET using Alternating Excitation and FCS reveals Progressive DNA Unwrapping i, Biophys J, July, In print, x-x.
[DOI] [pdf]
Marcel J M Schaaf, Wiepke J A Koopmans, Tobias Meckel, John van Noort, B. Ewa Snaar-Jagalska, Thomas Schmidt and Herman P Spaink (2009) Single-molecule microscopy reveals membrane microdomain organization of cells in, Biophys J, Aug, 97, 1206–1214.
[DOI] [pdf]
Stefan Semrau & Thomas Schmidt (2009) Membrane heterogeneity – from lipid domains to curvature effects., Soft Matter, 5, 3174:3186.
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Henriette Jensenius, Dionne C.G. Klein, Martin van Hecke, Tjerk H. Oosterkamp, Thomas Schmidt and Jens C. Jensenius. (2009) Mannan-Binding Lectin: Structure, Oligomerization and Flexibility Studied by Ato, J. Mol. Biol, 391, 246:259.
[DOI] [pdf]
Laurent Holtzer & Thomas Schmidt (2009) Tracking of Individual Molecules in Cells and Tissue., Single Particle Tracking and Single Molecule Energy Transfer, C. Bräuchle, D.C., -.
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Stefan Semrau, Timon Idema, Thomas Schmidt & Cornelis Strom (2009) Membrane mediated interactions measured using membrane domains, Biophys. J, 96, 4906:4915.
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Thomas Schmidt & Gerhard Schütz (2009) Single Molecule Analysis of Biomembranes., Handbook of Single-Molecule Biophysics, A. van Oijen & P. Hinterdorfer (eds.), , 19-42.
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Pedro Miguel Ribeiro Paulo, Alexander Gaiduk, Florian Kulzer, Gabby Krens, Herman P. Spaink, Thomas Schmidt and Michel Orrit. (2009) Photothermal Correlation Spectroscopy of Gold Nanoparticles in Solution., J. Phys. Chem. C, 113, 11451:11457.
[DOI] [pdf]
2008
Wiepke J A Koopmans and Thomas Schmidt and John van Noort (2008) Nucleosome immobilization strategies for single-pair FRET microscopy., Chemphyschem, Oct, 9, 2002–2009.
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Florian Kulzer, Thomas Schmidt, Michel Orrit & Herman P. Spaink (2008) Photothermal Detection of Individual Gold Nanoparticles: Perspectives for High-T, Chem. Phys. Chem, 9, 1761-6.
[DOI] [pdf]
S.F.Gabby Krens, Shuning He, Gerda E.M. Lamers, Annemarie H. Meijer, Jeroen Bakkers, Thomas Schmidt, Herman P. Spaink and B. Ewa Snaar-Jagalskaa. (2008) Distinct functions for ERK1 and ERK2 in cell migration processes during zebrafish, Dev. Biol, 319, 370-83.
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Sandra de Keijzer, Arnauld Serge, Freek van Hemert, Piet Lommerse, Gerda Lamers, Herman P. Spaink, Thomas Schmidt and B. Ewa Snaar-Jagalska. (2008) A Spatially Restricted Increase in Receptor Mobility is Involved in Directional Sensing., J. Cell Sci, 121, 1750-7.
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Paige Shaklee, Timon Idema, Gerbrand Koster, Cees Storm, Thomas Schmidt and Marileen Dogterom. (2008) Bidirectional membrane tube dynamics driven by nonprocessive motors., Proc. Natl. Acad. Sci, 105, 7993-7997.
[DOI] [pdf]
Stefan Semrau, Timon Idema, Laurent Holtzer, Thomas Schmidt and Cees Storm (2008) Accurate determination of elastic parameters for multi-component membranes., Phys. Rev. Lett, 100, 088101-4.
[DOI] [pdf]
Sandra de Keijzer and Thomas Schmidt (2008) Single-molecule imaging of cellular signaling in vivo., in Single Molecules and Nanotechnology, Springer Series in Biophysics, R. Rigle, 12, 107-129.
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2007
W. J A Koopmans and A. Brehm and C. Logie and T. Schmidt and J. van Noort (2007) Single-pair FRET microscopy reveals mononucleosome dynamics., J Fluoresc, Nov, 17, 785–795.
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Belinda Haupt, Matthew Osbourn, Rudolf Spanhoff, Sandra de Keijzer, Annette Müller-Taubenberger, B. Ewa Snaar-Jagalska and Thomas Schmidt (2007) Asymmetric Elastic Properties of Dictyostelium Discoideum Relates to Chemotaxis., Langmuir, 23, 9352-7.
[DOI] [pdf]
Laurent Holtzer, Tobias Meckel, and Thomas Schmidt (2007) Nanometric three-dimensional tracking of individual quantum dots in cells., Appl. Phys. Lett., 90, 053902..
[DOI] [pdf]
Stefan Semrau and Thomas Schmidt (2007) Particle image correlation spectroscopy (PICS). Retrieving nanometer-scale corre, Biophys J., 92, 613..
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2006
Lommerse PH, Vastenhoud K, Pirinen NJ, Magee AI, Spaink HP, Schmidt T (2006) Single-molecule diffusion reveals similar mobility for the Lck, H-ras, and K-ras, Biophys J, 91, 1090-7.
[DOI] [pdf]
2005
Piet H.M. Lommerse, B. Ewa Snaar-Jagalska, Herman P. Spaink and Thomas Schmidt (2005) Single-Molecule Diffusion Measurements of H_Ras at the Plasma Membrane of Live C, J.Cell Sci, 118, 1799.
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Schmauder, R, Librizzi, F, Canters, GW, Schmidt, T, Aartsma, TJ (2005) The oxidation state of a protein observed molecule-by-molecule, ChemPhysChem, 6, 1381-1386.
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Schmauder, R, Alagaratnam, S, Chan, C, Schmidt, T, Canters, GW, Aartsma, TJ (2005) Sensitive detection of the redox state of copper proteins using, JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 10, 683-687.
[DOI] [pdf]
2004
Martijn J. van Hemert, Maarten Niemantsverdriet, Thomas Schmidt, Claude Backend (2004) Isoform-specific differences in rapid nucleocytoplasmic shuttling cause distinct, J.Cell Sci, 117, 1411.
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Gerhard A. Blab, Thomas Schmidt, and Mats Nilsson (2004) Homogeneous detection of single rolling circle replication products, Anal.Chem, 76, 495.
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P.H.M. Lommerse, H.P. Spaink and T. Schmidt (2004) In vivo plasma membrane organization: results of biophysical approaches, BBA, 1664, 119.
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Gerhard A. Blab, Silke Oellerich, Reinier Schumm, and Thomas Schmidt (2004) Wide-Field Imaging and Spectroscopy of Localized Fluorophores, Opt.Lett, 29, 727.
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Piet H.M. Lommerse, Gerhard A. Blab, Laurent Cognet, Gregory S. Harms, Ewa B. Snaar-Jagalska, Herman P. Spaink, Thomas Schmidt. (2004) Single-molecule imaging of lipid-anchored proteins reveals domains in the cytoplasmic leaflet of the cell membrane., Biophys.J, 86, 609.
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Gradinaru, CC, Martinsson, P, Aartsma, TJ, Schmidt, T (2004) Simultaneous atomic-force and two-photon fluorescence imaging of, ULTRAMICROSCOPY, 99, 235-245.
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2002
C.K. Riener, G. Kada, C. Borken, F. Kienberger, P. Hinterdorfer, H. Schindler, T. Schmidt and H. Gruber. (2002) Bioconjugation for biospecific detection of single molecules in atomic force microscopy and single-dye tracing., Recent Research Developments in Bioconjugate Chemistry, 1, 133.
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Ralf Schmauder, Thomas Schmidt, Jan Pieter Abrahams and Maxim E. Kuil (2002) Screening crystallisation conditions using fluorescence correlation spectroscopy, Acta Cryst.D, 58, 1536.
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Thomas Schmidt, et al. (2002) Datasheet: Photostability Data for Fluorescent Dyes – an update., Single Molecules, 3, 327.
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2001
Gerhard A. Blab, Piet H.M. Lommerse, Laurent Cognet, Gregory S. Harms, and Thomas Schmidt. (2001) Two-Photon Excitation Action Cross-Sections of the Autofluorescent Proteins., Chem.Phys.Lett, 350, 71.
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Werner Trabesinger, Bert Hecht, Urs P. Wild, Gerhard J. Schütz, Hansgeorg Schindler and Thomas Schmidt. (2001) Statistical Analysis of Single Molecule Assays., Anal.Chem, 73, 1100.
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G.S. Harms, L. Cognet, G.A. Blab, P.H.M. Lommerse, H.P. Spaink and Th.Schmidt (2001) Autofluorescent Proteins in Single-Molecule Research, Biophys.J, 80, 2396.
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G.S. Harms, L. Cognet, G.A. Blab, P.H.M. Lommerse, H. Kahr, R. Gamsjäger, Herman P. Spaink, Nikolai M. Soldatov, Christoph Romanin and Thomas Schmidt. (2001) Single-Molecule Imaging of L-type Ca2+, Channels in Live Cells., Biophys.J, 81, 2639.
[DOI] [pdf]
Thomas Schmidt (2001) Datasheet: Photostability Data for Fluorescent Dyes, Single Molecules, 2, 217.
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2000
Klaus J. F. Kepplinger, Heike Kahr, Günter Förstner, Max Sonnleitner, Hansgeorg Schindler, Thomas Schmidt, Klaus Groschner, Nikolai M Soldatov, Christoph Romanin. (2000) A sequence in the carboxy-terminus of the α1C subunit important for targeting, conductance and open probability of L-type Ca2+ channels, FEBS Lett, 477, 161.
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L. Cognet, G.S. Harms, G.A. Blab, P.H.M. Lommerse and Th.Schmidt (2000) Simultaneous ‘dual-color and dual- polarization’ imaging of single molecules, Appl.Phys.Lett, 77, 4052.
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Th. Schmidt and H. Schindler (2000) Analytical Chemistry and Biophysics at the Single-Molecule Level, in Organic Mesoscopic Chemistry, H. Masuhara & F.C. DeSchrijver eds., Blackwell.
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1999
Th. Schmidt, P. Hinterdorfer and H. Schindler (1999) Microscopy for Recognition of Individual Biomolecules, Microscopy Research and Technique, 44, 339.
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G.S. Harms, M. Sonnleitner, G.J.Schütz, H.J. Gruber and T.Schmidt (1999) Single-Molecule Anisotropy Imaging, Biophys.J, 77, 2864.
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M. Sonnleitner, G.J.Schütz and T.Schmidt (1999) Imaging Individual Fluorophores by 2-Photon Microscopy, Chem.Phys.Lett, 300, 221.
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A. Sonnleitner, G.J.Schütz and T.Schmidt (1999) Free Brownian Motion of Individual Lipid Molecules in Biomembranes, Biophys.J, 77, 2638.
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W. Trabesinger, G.J.Schütz, H.J.Gruber, H. Schindler and T.Schmidt (1999) Detection of Individual Oligonucleotide Pairing by Single Molecule Microscopy, Anal.Chem, 72, 270.
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1998
G.J.Schütz, W. Trabesinger and T.Schmidt (1998) Direct Observation of Ligand Colocalization on Individual Receptor Molecules, Biophys.J, 74, 2223.
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1997
G.J.Schütz, H.Schindler and T.Schmidt (1997) Single Molecule Microscopy on Model Membranes Reveals Anomalous Diffusion, Biophys.J, 73, 1073.
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G.J.Schütz, H.Schindler and T.Schmidt (1997) Imaging Single Molecule Dichroism, Opt.Lett, 22, 651.
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G.J.Schütz, H.J.Gruber, H.Schindler and T.Schmidt (1997) Fluorophores for Single Molecule Microscopy, J.Luminescence, 72-74, 18.
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T.Schmidt, P.Hinterdorfer and H.Schindler (1997) Mikroskopie zur Erkennung einzelner Biomoleküle (Microscopy for Recognition of Individual Biomolecules), Laser&Optolektronik, 29, 56.
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1996
T.Schmidt, G.J.Schütz, H.J.Gruber and H.Schindler (1996) Local Stoichiometries Determined by Counting Individual Molecules, Anal.Chem., 68, 4397.
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T.Schmidt, G.J.Schütz, W.Baumgartner, H.J.Gruber and H.Schindler (1996) Imaging of Single Molecule Diffusion., Proc.Natl.Acad.Sci. USA, 93, 2926.
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1995
T.Schmidt, G.J.Schütz, W.Baumgartner H.J.Gruber and H.Schindler (1995) Characterization of Photophysics and Mobility of Single Molecules in a Fluid Lipid Membranes., J.Phys.Chem., 99, 17662.
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